|
|
Accession Number |
TCMCG057C08442 |
gbkey |
CDS |
Protein Id |
XP_018470065.1 |
Location |
complement(join(34463294..34463485,34463573..34463815,34463891..34464169,34464259..34464456,34464567..34464728,34464903..34465376,34465456..34465710,34465805..34465911,34465999..34466615,34466742..34466995,34467230..34467527,34467622..34467745,34467837..34468078,34468192..34468318,34468401..34468855,34468932..34469236,34469330..34469644,34469788..34470056,34470149..34470939,34471027..34471513,34471599..34471989,34472076..34472168,34472252..34472375,34472452..34472614,34482044..34482167)) |
Gene |
LOC108841801 |
GeneID |
108841801 |
Organism |
Raphanus sativus |
|
|
Length |
2362aa |
Molecule type |
protein |
Topology |
linear |
Data_file_division |
PLN |
dblink |
BioProject:PRJNA344915 |
db_source |
XM_018614563.1
|
Definition |
PREDICTED: pre-mRNA-processing-splicing factor 8A-like isoform X2 [Raphanus sativus] |
CDS: ATGTGGAACAGCAACGACGGCATGCCGTTAGCCCCTCCCGGCACCGGCGCCTCGATGATTCCGCCACCGCATCCTTCTTACACCGCGCTTCCGCCGCATCCTTCTAATCCAACTCCTCCTCCTCCTCCGGTCGAGCCTACTCCCGAAGAAGCTGAGGCGAAGCTCGAGGAGAAGGCGCGCAAATGGATGCAGCTGAACTCGAAGCGCTACGGCGACAAGAGGAAGTTCGGATTCGTGGAAACTCAGAAGGAGGACATGCCGCCTGAGCACGTCAGGAAGATTATCAGGGATCATGGTGATATGTCATCGAAGAAGTTTAGTCACGATAAACGTGTGTACCTTGGAGCTCTTAAGTTCGTCCCTCACGCCGTCTTCAAGCTCCTGGAGAATATGCCTATGCCCTGGGAGCAGGTTCGAGATGTTAAGGTTCTGTACCACATCACCGGTGCTATTACATTCGTGAACGAGATTCCATGGGTTGTGGAACCTATTTACATGGCTCAGTGGGGCACTATGTGGATTATGATGCGAAGGGAGAAGAGGGATCGTCGTCATTTCAAGAGGATGCGGTTTCCACCGTTTGATGATGAGGAGCCTCCACTGGACTACGCAGACAACTTGTTGGACGTTGATCCTCTCGAGCCAATTCAGTTGGAGCTTGACGAGGAAGAAGATTCTGCTGTACACACTTGGTTTTATGACCACAAGCCACTAGTAAAGACCAAGCTGATTAATGGTCCCAGTTACCGGAGGTGGAATCTCTCTCTTCCGATTATGGCTACCCTTCACAGGCTGGCAGGCCAGCTGTTGTCTGATTTGATCGATCGCAACTACTTCTACTTGTTTGACATGCCGTCTTTCTTCACCGCCAAGGCTCTTAACATGTGTATACCTGGTGGTCCTAAGTTTGAACCTTTGTACCGTGATATGGAGAAAGGGGAAGAGGACTGGAATGAGTTCAACGACATCAACAAGCTTATCATTCGTTCCCCTCTTCGAACTGAGTATAGAATAGCCTTTCCTCACCTGTACAACAATCGTCCCAGGAAAGTCAAACTCTGTGTGTATCACAGTCCTATGGTGATGTATATAAAGACCGAGGATCCTGATCTTCCTGCGTTTTATTATGATCCGTTGCTTCACCCGATAAGCAACACCAATAAGGAGAGGCGTGAAAGGAACGTTTATGAAGATGATGAAGAGGACGACTTTACCTTACCAGAGGGAGTGGAACCTTTGCTAAAAGACACCCACCTCTACACTGACACTACAGCTGCTGGCATTTCATTGCTGTTTGCCCCACGACCTTTCAATATGAGGTCTGGGAGAACAAGGCGATCAGAAGATATTCCCTTGGTGTCAGAGTGGTTCAAGGAGCACTGTCCTCCAGCTTATCCGGTTAAAGTTCGAGTTAGTTACCAAAAGCTTCTGAAGTGCTATGTTCTGAATGAGTTGCACCATAGACCACCTAAAGCCCAGAAGAAGAAGCACTTATTCCGCTCTCTTGCAGCTACAAAGTTTTTCCAGAGTACTGAGTTGGATTGGGTTGAAGTAGGTCTGCAAGTCTGCAGGCAGGGGTATAATATGCTGAACCTGCTGATCCACAGGAAGAGTTTGAACTACCTGCACCTTGACTACAACTTCAACCTGAAGCCTGTTAAAACATTGACCACCAAAGAGCGAAAGAAGTCACGTTTTGGGAACGCTTTCCATCTCTGCCGTGAGATCCTCCGGCTGACAAAGCTTGTCGTAGATGCAAATGTTCAGTTCAGACTTGGAAATGTTGATGCTTTCCAACTGGCTGACGGTCTGCAGTATATTTTCTCCCATGTTGGCCAGTTGACCGGTATGTATCGTTACAAATACAGACTGATGAGGCAGATTAGGATGTGCAAGGATTTGAAGCACTTGATATATTACCGTTTCAATACCGGTCCTGTGGGTAAGGGACCAGGGTGTGGATTTTGGGCCCCAATGTGGAGGGTATGGTTGTTTTTCCTTCGTGGAATAGTTCCTCTTCTTGAACGATGGCTAGGGAATCTTCTTGCTCGTCAGTTTGAGGGGCGTCATTCAAAAGGAGTTGCCAAAACTGTCACGAAACAGAGAGTTGAGAGCCACTTCGATTTGGAACTGCGAGCTGCTGTCATGCATGACGTCCTTGATGCCATGCCAGAGGGTATCAAGCAAAACAAAGCTCGAACAATATTACAGCACCTTAGCGAGGCATGGCGATGTTGGAAAGCTAATATCCCTTGGAAGGTCCCTGGGTTACCCGTGCCAATTGAGAATATGATCCTGCGTTATGTCAAATCTAAGGCTGATTGGTGGACAAATGTTGCTCACTACAATCGTGAGCGTATCAGAAGAGGGGCTACGGTTGATAAGACTGTTTGCAGAAAGAATCTTGGAAGGTTGACTCGTCTTTGGCTAAAGGCTGAACAGGAACGGCAGCACAATTACCTGAAAGACGGTCCATATGTCACTCCGGAGGAAGCACTCGCAATTTATACAACTACTGTCCATTGGCTGGAATCGAGGAAATTTTCTCCAATTCCATTCCCTCCATTGTCTTACAAACATGACACAAAGTTGCTTATCCTGGCCCTTGAGAGACTGAAGGAATCATACAGTGTTGCTGTGAGGTTGAATCAGCAGCAGCGAGAGGAGCTTGGTCTGATTGAACAAGCGTATGACAATCCTCATGAAGCTCTGTCAAGAATTAAACGTCATCTTCTCACCCAGCGTGGCTTCAAAGAGGTTGGCATAGAGTTTATGGATCTATACAGCTACTTGATTCCAGTTTATGAAATAGAGCCTCTGGAGAAAATAACTGATGCCTACCTTGACCAATACTTGTGGTACGAGGGTGATAAGCGCCACTTGTTCCCAAACTGGATCAAGCCAGCAGACTCAGAGCCGCCACCACTTCTGGTTTACAAGTGGTGTCAAGGTATCAATAATTTACAAGGCATATGGGACACGGGGGATGGGCAATGTGTGGTGATGCTGCAGACTAAGTTTGAAAAGTTCTTTGAGAAGATCGATTTGACCATGTTGAACAGGCTGCTTCGTTTGGTTCTTGACCACAATATAGCGGATTATGTGTCTGCCAAGAATAACGTGGTTCTTTCTTACAAAGATATGAGTCATACTAACTCGTATGGTCTGATTAGGGGACTTCAGTTTGCATCTTTTGTTGTTCAGTTTTATGGACTATTGCTTGATCTTTTGCTTCTTGGTCTGACTCGGGCGAGTGAAATTGCTGGGCCACCACAGATGCCCAACGAGTTTATGACGTTTTGGGATACAAAAGTGGAGACACGGCATCCCATAAGACTGTATTCTCGGTATATAGACAAAGTTCATATAATGTTCAAATTTACCCATGAAGAGGCCAGGGATCTTATTCAGCGCTATCTTACTGAGCATCCTGATCCCAACAATGAAAACATGGTGGGATACAACAATAAGAAGTGCTGGCCAAGAGATGCAAGGATGAGGTTGATGAAACATGATGTCAATCTTGGTAGAAGTGTCTTCTGGGACATGAAGAATCGTCTTCCTCGGAGCATAACAACTTTGGAGTGGGAGAATGGCTTTGTCTCTGTCTACAGCAAGGATAATCCCAACCTGCTCTTCAGCATGTGTGGATTTGAAGTTCGCATACTTCCAAAAATCAGGATGACTCAGGAAGCTTTCAGCAACACAAGAGATGGTGTCTGGAATCTGCAAAATGAGCAGACCAAGGAGAGGACTGCCGTTGCTTTTCTGCGGGTTGATGATGAACACATGAAGGTGTTTGAGAATCGTGTCAGGCAGATCCTTATGTCTTCAGGATCAACCACCTTCACCAAAATTGTCAATAAATGGAATACAGCTCTAATTGGTCTCATGACCTACTTCCGTGAAGCCACTGTGCATACTCAAGAGCTCTTGGATCTACTCGTGAAGTGCGAAAACAAAATTCAAACAAGGATTAAGATAGGGCTGAACTCGAAGATGCCTAGTCGGTTTCCTCCCGTTATCTTCTACACTCCGAAAGAAATTGGTGGGCTGGGAATGTTGTCAATGGGTCATATTTTGATTCCACAAAGTGACCTTCGGTACAGCAAGCAGACAGATGTAGGGGTAACCCACTTTAGGAGTGGAATGAGCCATGAGGAAGATCAGCTTATACCAAATCTGTATCGTTACATACAGCCATGGGAAAGTGAGTTTATTGATTCACAGCGGGTGTGGGCAGAGTATGCTTTAAAGAGGCAGGAAGCACAGGCTCAAAATAGGCGTCTTACGTTGGAGGATTTGGAGGACTCTTGGGATAGGGGAATTCCTCGAATAAACACACTCTTTCAGAAGGATAGGCACACGTTAGCGTATGATAAAGGTTGGAGGGTTCGGACCGACTTTAAGCAGTACCAAGTCCTCAAACAAAATCCTTTCTGGTGGACGCACCAGAGGCATGATGGGAAGCTGTGGAATTTAAACAATTACCGAACTGATGTTATCCAAGCTCTTGGAGGTGTTGAGGGTATCCTTGAGCACACTTTATTCAAGGGGACATACTTCCCAACATGGGAGGGTCTTTTCTGGGAGAAGGCATCTGGGTTTGAGGAGTCGATGAAATATAAGAAGCTGACGAATGCACAGAGGTCTGGTCTGAACCAGATTCCAAACAGAAGATTCACGCTTTGGTGGTCGCCAACAATAAATCGAGCGAATGTTTATGTGGGTTTCCAAGTGCAGTTGGATCTGACAGGAATTTTTATGCATGGAAAGATTCCTACACTGAAGATATCTCTGATTCAGATTTTCCGTGCCCATTTGTGGCAAAAGATCCATGAGAGTGTTGTTATGGATCTTTGTCAAGTATTGGACCAAGAGTTGGATGCTTTGGAGATTGAAACTGTTCAGAAGGAGACAATTCATCCAAGGAAGAGTTATAAGATGAACAGCTCCTGCGCTGATGTTCTTCTGTTTGCTGCCCATAAATGGCCAATGTCAAAACCAAGCCTGGTTGCTGAGTCAAAGGATGTGTTCGACCAGAAAGCTAGCAACAAGTATTGGATAGATGTGCAACTTCGGTGGGGAGATTATGATTCCCATGATATTGAGCGTTATACTAGGGCCAAATTCATGGATTATACAACTGATAACATGTCAATCTATCCATCTCCAACAGGTGTAATGATTGGGCTTGATCTGGCATACAATTTGCATTCTGCATTTGGCAATTGGTTCCCAGGTTCTAAACCTCTTCTTGCTCAAGCAATGAACAAGATCATGAAGTCTAATCCAGCTCTGTACGTGTTGAGAGAGAGGATAAGGAAAGGTTTGCAGTTGTACTCATCTGAGCCTACAGAGCCTTATTTGTCATCGCAAAACTATGGTGAAATATTCAGCAATCAAATTATATGGTTTGTCGATGATACCAATGTCTATCGTGTTACAATTCACAAGACATTTGAAGGAAATTTAACAACAAAGCCTATCAATGGTGCGATCTTTATTTTTAATCCAAGAACTGGGCAGCTATTCCTGAAGGTTATCCATACAAGCGTTTGGGCTGGTCAGAAGCGTCTTGGTCAGCTAGCGAAATGGAAGACTGCTGAAGAGGTGGCTGCCCTTGTGCGGTCTCTCCCTGTTGAAGAACAGCCAAAACAAGTTATTGTTACTCGCAAAGGAATGCTCGATCCCCTTGAGGTCCACTTACTGGATTTCCCCAACATTGTTATCAAGGGAAGTGAACTGCAGCTTCCATTCCAGGCGTGCCTTAAGATAGAGAAATTTGGTGATCTGATTTTGAAGGCCACAGAACCACAGATGGTCCTATTCAATATCTATGATGATTGGTTGAAGAGTATCTCTTCGTATACTGCCTTTTCAAGACTCATTCTGATCCTTCGTGCGCTTCACGTGAATAATGAGAAGGCTAAGATGCTGCTGAAGCCCGACAAGTCTATTGTCACTGAGCCGCATCACATCTGGCCCTCTCTCACTGACGACCAGTGGATGAAGGTGGAGGTAGCTCTTAGGGATCTTATCCTATCTGACTATGCAAAGAAGAACAATGTGAATACCTCAGCTCTGACACAATCAGAGATCAGAGATATTATCCTTGGAGCTGAGATTACCCCACCCTCTCAACAGAGGCAACAGATAGCTGAGATCGAGAAACAGGCAAAAGAAGCCAGCCAGCTTACTGCAGTCACAACCAGAACGACAAATATTCATGGTGATGAGCTCATTAGCACTACCATTAGCCCCTACGAGCAAGCTGCATTCGGTTCCAAGACAGATTGGCGTGTGCGTGCAATATCATCTACGAACCTCTACCTCAGAGTCAATCATATCTACGTGAACTCTGATGACATAAAGGAGACCGGATACACATACATCATGCCAAAGAACATCCTGAAGAAGTTCATATGCGTAGCAGATCTTCGTAGTCAAATTGCTGGATATCTATATGGTATAAGCCCCCCTGATAATCCCCAGGTGAAGGAAATCCGTTGTGTTGTGATGGTGCCACAGCTGGGAAATCACCAGCAAGTTAACCTGCCGTTAGCTCTTCCTGAGCATGATTTCTTAAATAATCTCGAGCCATTGGGATGGCTGCACACACAGCCTAACGAGCTCCCTCAATTGTCACCACAGGATGTGACTGCTCATTCCCGCATTCTGGAGAACAACAAGCAATGGGATGGAGAAAAATGCATCATCCTGACATGCAGTTTCACTCCGGGGTCCTGCTCTTTGACATCATATAAGCTGACCCAAGCCGGGTATGAATGGGGACGTCTCAACAAGGACACAGGCAGCAATCCTCATGGCTACCTTCCCACCCATTATGAGAAGGTTCAAATGCTATTGAGTGACCGATTCCTCGGGTTTTACATGGTTCCTGAGAACGGATCGTGGAACTACAACTTTATGGGAGTGAAGCACACGGTGGGCATGAAATATAGCGTCAAACTTGGAACCCCAAAGGAGTTCTATCACGAGGAACATCGACCCACTCATTTCCTGGAGTTCAGCAACATGGAGGAGGCTGACTTCGCTGAGGGAGATCGTGAAGACACCTTTGCTTGA |
Protein: MWNSNDGMPLAPPGTGASMIPPPHPSYTALPPHPSNPTPPPPPVEPTPEEAEAKLEEKARKWMQLNSKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKFSHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKVLYHITGAITFVNEIPWVVEPIYMAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVHTWFYDHKPLVKTKLINGPSYRRWNLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMPSFFTAKALNMCIPGGPKFEPLYRDMEKGEEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLCVYHSPMVMYIKTEDPDLPAFYYDPLLHPISNTNKERRERNVYEDDEEDDFTLPEGVEPLLKDTHLYTDTTAAGISLLFAPRPFNMRSGRTRRSEDIPLVSEWFKEHCPPAYPVKVRVSYQKLLKCYVLNELHHRPPKAQKKKHLFRSLAATKFFQSTELDWVEVGLQVCRQGYNMLNLLIHRKSLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANVQFRLGNVDAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEALAIYTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQQQREELGLIEQAYDNPHEALSRIKRHLLTQRGFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQGIWDTGDGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIADYVSAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQFYGLLLDLLLLGLTRASEIAGPPQMPNEFMTFWDTKVETRHPIRLYSRYIDKVHIMFKFTHEEARDLIQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENGFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDVGVTHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFAAHKWPMSKPSLVAESKDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQVIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKSIVTEPHHIWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNIHGDELISTTISPYEQAAFGSKTDWRVRAISSTNLYLRVNHIYVNSDDIKETGYTYIMPKNILKKFICVADLRSQIAGYLYGISPPDNPQVKEIRCVVMVPQLGNHQQVNLPLALPEHDFLNNLEPLGWLHTQPNELPQLSPQDVTAHSRILENNKQWDGEKCIILTCSFTPGSCSLTSYKLTQAGYEWGRLNKDTGSNPHGYLPTHYEKVQMLLSDRFLGFYMVPENGSWNYNFMGVKHTVGMKYSVKLGTPKEFYHEEHRPTHFLEFSNMEEADFAEGDREDTFA |